Publication:
The Effect of Cell Adhesion on the Interpretation of Scratch Assay Data: A Non-Local Model

dc.contributor.authorAtici Endes, Emine
dc.contributor.authorSherratt, Jonathan A.
dc.contributor.authorGerisch, Alf
dc.date.accessioned2025-12-11T00:35:41Z
dc.date.issued2025
dc.departmentOndokuz Mayıs Üniversitesien_US
dc.department-temp[Atici Endes, Emine] Ondokuz Mayis Univ, Dept Math, TR-55270 Samsun, Turkiye; [Atici Endes, Emine; Sherratt, Jonathan A.] Heriot Watt Univ, Maxwell Inst, Dept Math, Edinburgh EH14 4AS, Scotland; [Gerisch, Alf] Tech Univ Darmstadt, Fachbereich Math, AG Numer & Wissensch Rechnen, Dolivostr 15, D-64293 Darmstadt, Germanyen_US
dc.description.abstractScratch assays are affordable methods developed for sampling wound healing in a laboratory setting. Thanks to these assays, it is possible to investigate the dynamical structure of cell migration and proliferation, which play a central role in the healing process of the wound. Johnston et al. (2015, BMC Syst. Biol., 9, 38) use scratch assay data to estimate migration and proliferation parameters in a Fisher-type model. The present study is a new attempt to interpret the same data using a non-local continuum approach that incorporates cell-cell adhesion. The non-local part of our model includes two different force functions representing different types of cell adhesion. Using these functions, we estimate the parameters involved in the diffusive and adhesive motion. The original and our model give similarly good agreement with the experimental data for their respective (optimal) parameter sets but the estimated diffusion coefficients differ significantly between both sets. Consequently, Johnston et al.'s data, and thus their experimental methodology, are incapable of providing guidance on the effect of cell-cell adhesion in wound healing.en_US
dc.description.sponsorshipMinistry of National Education a centre - Turkish Government, Ankara, Turkeyen_US
dc.description.sponsorshipThis research was supported in part by the Ministry of National Education a centre for doctoral training funded by the Turkish Government, Ankara, Turkey.en_US
dc.description.woscitationindexScience Citation Index Expanded
dc.identifier.doi10.1093/imammb/dqaf010
dc.identifier.issn1477-8599
dc.identifier.issn1477-8602
dc.identifier.pmid40899661
dc.identifier.scopusqualityQ4
dc.identifier.urihttps://doi.org/10.1093/imammb/dqaf010
dc.identifier.urihttps://hdl.handle.net/20.500.12712/37704
dc.identifier.wosWOS:001578591600001
dc.identifier.wosqualityQ3
dc.language.isoenen_US
dc.publisherOxford University Pressen_US
dc.relation.ispartofMathematical Medicine and Biology-A Journal of the Imaen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectWound Healingen_US
dc.subjectScratch Assayen_US
dc.subjectNon-local Continuum Modelen_US
dc.subjectCell-Cell Adhesionen_US
dc.titleThe Effect of Cell Adhesion on the Interpretation of Scratch Assay Data: A Non-Local Modelen_US
dc.typeArticleen_US
dspace.entity.typePublication

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