Publication:
Spread of Carbapenem-Resistant International Clones of Acinetobacter baumannii in Turkey and Azerbaijan: A Collaborative Study

dc.authorscopusid55508097300
dc.authorscopusid8726721500
dc.authorscopusid36873252700
dc.authorscopusid55651372300
dc.authorscopusid8609291900
dc.authorscopusid57190680638
dc.authorscopusid57210468858
dc.contributor.authorAhmed, S.S.
dc.contributor.authorAlp, E.
dc.contributor.authorUlu-Kiliç, A.
dc.contributor.authorDinç, G.
dc.contributor.authorAktaş, Z.
dc.contributor.authorAda, B.
dc.contributor.authorBagırova, F.
dc.date.accessioned2020-06-21T13:32:11Z
dc.date.available2020-06-21T13:32:11Z
dc.date.issued2016
dc.departmentOndokuz Mayıs Üniversitesien_US
dc.department-temp[Ahmed] Salman Shaheer, Department of Infectious Diseases, Erciyes Üniversitesi, Kayseri, Kayseri, Turkey, Genome and Stem Cell Center, Erciyes Üniversitesi, Kayseri, Kayseri, Turkey; [Alp] Emine, Department of Infectious Diseases, Erciyes Üniversitesi, Kayseri, Kayseri, Turkey; [Ulu-Kiliç] Ayşegül, Department of Infectious Diseases, Erciyes Üniversitesi, Kayseri, Kayseri, Turkey; [Dinç] Gökçen, Department of Infectious Diseases, Erciyes Üniversitesi, Kayseri, Kayseri, Turkey, Department of Medical Microbiology, Erciyes Üniversitesi, Kayseri, Kayseri, Turkey; [Aktaş] Zerrin, Department of Infectious Diseases, Istanbul Üniversitesi, Istanbul, Turkey; [Ada] B., Department of Infectious Diseases, Ege Üniversitesi, Izmir, Turkey; [Bagırova] F., Department of Infectious Diseases, Azerbaijan Medical University, Baku, Azerbaijan; [Baran] Irmak, Department of Infectious Diseases, Ankara Teaching and Research Hospital, Ankara, Turkey; [Ersoy] Yasemin, Department of Infectious Diseases, Inönü Üniversitesi, Malatya, Turkey; [Esen] Şaban, Department of Infectious Diseases, Ondokuz Mayis Üniversitesi, Samsun, Turkey; [Güven] Tümer G., Department of Infectious Diseases, Cokurva University, Adana, Turkey; [Hopman] Joost, Department of Medical Microbiology, Radboud University Medical Center, Nijmegen, Gelderland, Netherlands; [Hoşoǧlu] Salih, Department of Infectious Diseases, Trabzon Teaching hospital, Trabzon, Turkey; [Köksal] Fatih, Department of Infectious Diseases, Cokurva University, Adana, Turkey; [Parlak] Emine, Department of Infectious Diseases, Ataturk University, Faculty of Medicine, Erzurum, Turkey; [Yalçin] Ata Nevzat, Department of Infectious Diseases, Akdeniz Üniversitesi, Antalya, Turkey; [Yilmaz] Gürdal, Department of Infectious Diseases, Karadeniz Technical University, Trabzon, Trabzon, Turkey; [Voss] Andreas, Department of Medical Microbiology, Radboud University Medical Center, Nijmegen, Gelderland, Netherlands; [Melchers] Willem J.G., Department of Medical Microbiology, Radboud University Medical Center, Nijmegen, Gelderland, Netherlandsen_US
dc.description.abstractEpidemic clones of Acinetobacter baumannii, described as European clones I, II, and III, are associated with hospital epidemics throughout the world. We aimed to determine the molecular characteristics and genetic diversity between European clones I, II, and III from Turkey and Azerbaijan. In this study, a total of 112 bloodstream isolates of carbapenem-resistant Acinetobacter spp. were collected from 11 hospitals across Turkey and Azerbaijan. The identification of Acinetobacter spp. using conventional and sensitivity tests was performed by standard criteria. Multiplex polymerase chain reaction (PCR) was used to detect OXA carbapenemase-encoding genes (bla<inf>OXA-23-like</inf>, bla<inf>OXA-24-like</inf>, bla<inf>OXA-51-like</inf>, and bla<inf>OXA-58-like</inf>). Pulsed-field gel electrophoresis (PFGE) typing was used to investigate genetic diversity. The bla<inf>OXA-51-like</inf> gene was present in all 112 isolates, 75 (67 %) carried bla<inf>OXA-23-like</inf>, 7 (6.2 %) carried bla<inf>OXA-58-like</inf> genes, and 5 (4.5 %) carried bla<inf>OXA-24-like</inf> genes. With a 90 % similarity cut-off value, 15 clones and eight unique isolates were identified. The largest clone was cluster D, with six subtypes. Isolates from clusters D and I were widely spread in seven different geographical regions throughout Turkey. However, F cluster was found in the northern and eastern regions of Turkey. EU clone I was grouped within J cluster with three isolates found in Antalya, Istanbul, and Erzurum. EU clone II was grouped in the U cluster with 15 isolates and found in Kayseri and Diyarbakır. The bla<inf>OXA-24-like</inf> gene in carbapenemases was identified rarely in Turkey and has been reported for the first time from Azerbaijan. Furthermore, this is the first multicenter study in Turkey and Azerbaijan to identify several major clusters belonging to European clones I and II of A. baumannii. © 2016, Springer-Verlag Berlin Heidelberg.en_US
dc.identifier.doi10.1007/s10096-016-2685-x
dc.identifier.endpage1468en_US
dc.identifier.issn0934-9723
dc.identifier.issn1435-4373
dc.identifier.issue9en_US
dc.identifier.pmid27259712
dc.identifier.scopus2-s2.0-84982267557
dc.identifier.scopusqualityQ1
dc.identifier.startpage1463en_US
dc.identifier.urihttps://doi.org/10.1007/s10096-016-2685-x
dc.identifier.volume35en_US
dc.identifier.wosWOS:000385857700013
dc.identifier.wosqualityQ2
dc.language.isoenen_US
dc.publisherSpringer Verlag service@springer.deen_US
dc.relation.ispartofEuropean Journal of Clinical Microbiology & Infectious Diseasesen_US
dc.relation.journalEuropean Journal of Clinical Microbiology & Infectious Diseasesen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.titleSpread of Carbapenem-Resistant International Clones of Acinetobacter baumannii in Turkey and Azerbaijan: A Collaborative Studyen_US
dc.typeArticleen_US
dspace.entity.typePublication

Files