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Molecular Identification and Phylogenetic Analysis of Non-Cytopathic Bovine Viral Diarrhea Virus Isolate Obtained From a Local Respiratory Outbreak in Northern Turkey

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dc.authorscopusid15062055100
dc.authorscopusid15022421000
dc.authorscopusid57189622256
dc.authorscopusid57194471031
dc.authorscopusid57194463848
dc.authorscopusid35792326800
dc.authorscopusid57194465289
dc.contributor.authorYazici, Z.
dc.contributor.authorGümüşova, S.
dc.contributor.authorTamer, C.
dc.contributor.authorÇağIrgan, A.A.
dc.contributor.authorAkman, A.
dc.contributor.authorÖzan, E.
dc.contributor.authorKadi, H.
dc.date.accessioned2020-06-21T13:19:36Z
dc.date.available2020-06-21T13:19:36Z
dc.date.issued2017
dc.departmentOndokuz Mayıs Üniversitesien_US
dc.department-temp[Yazici] Zafer, Deparment of Virology, Ondokuz Mayis Üniversitesi, Samsun, Turkey; [Gümüşova] Semra Okur, Deparment of Virology, Ondokuz Mayis Üniversitesi, Samsun, Turkey; [Tamer] Cüneyt, Deparment of Virology, Ondokuz Mayis Üniversitesi, Samsun, Turkey; [ÇağIrgan] Abdurrahman Anil, Deparment of Virology, Ondokuz Mayis Üniversitesi, Samsun, Turkey; [Akman] Ayhan, Samsun Veterinary Control Institute, Virology Laboratory, Samsun, Turkey; [Özan] Emre, Samsun Veterinary Control Institute, Virology Laboratory, Samsun, Turkey; [Kadi] Hamza, Samsun Veterinary Control Institute, Virology Laboratory, Samsun, Turkey; [Palanci] Hasan Sercan, Deparment of Virology, Ondokuz Mayis Üniversitesi, Samsun, Turkey; [Albayrak] Harun, Deparment of Virology, Ondokuz Mayis Üniversitesi, Samsun, Turkeyen_US
dc.description.abstractIn February 2016, a local respiratory disease outbreak with two fatalities was reported in Samsun, Turkey. A non-cytopathic bovine viral diarrhea virus (ncp-BVDV) was identified from the organ and leucocyte samples of dead juvenile heifers using RT-PCR with specific primers for the NS2/3 gene coding region. The NS2/3 gene of BVDV was sequenced and compared with other published sequences of BVDV. The sequences of our isolate which was named as Samsun TR, had 81-83% nucleotite (nt) identity for BVDV-1. Phylogenetic analysis revealed that Samsun-TR was closely related to LC089875 (Japan), AF526381 (China) and also shared 83% nucleotide(nt) identity with them. The NS2/3 gene sequence of Samsun-TR was deposited in the GenBank database with the accession number of KX428495.en_US
dc.identifier.doi10.21521/mw.5694
dc.identifier.endpage288en_US
dc.identifier.issn0025-8628
dc.identifier.issue5en_US
dc.identifier.scopus2-s2.0-85020293255
dc.identifier.scopusqualityQ4
dc.identifier.startpage284en_US
dc.identifier.urihttps://doi.org/10.21521/mw.5694
dc.identifier.volume73en_US
dc.identifier.wosWOS:000426090600001
dc.identifier.wosqualityQ4
dc.language.isoenen_US
dc.publisherPolskie Towarzystwo Nauk Weterynaryjnychen_US
dc.relation.ispartofMedycyna Weterynaryjna-Veterinary Medicine-Science and Practiceen_US
dc.relation.journalMedycyna Weterynaryjna-Veterinary Medicine-Science and Practiceen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectBVDVen_US
dc.subjectELISAen_US
dc.subjectNucleotide Sequenceen_US
dc.subjectPhylogenetic Analysisen_US
dc.subjectRT-PCRen_US
dc.titleMolecular Identification and Phylogenetic Analysis of Non-Cytopathic Bovine Viral Diarrhea Virus Isolate Obtained From a Local Respiratory Outbreak in Northern Turkeyen_US
dc.typeArticleen_US
dspace.entity.typePublication

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