Publication:
Genome-Based Classification of Three Novel Actinobacteria From the Karakum Desert: Jiangella asiatica sp. nov., Jiangella aurantiaca sp. nov. and Jiangella ureilytica sp. nov

dc.authorscopusid55876591700
dc.authorscopusid58508171000
dc.authorscopusid8394367400
dc.authorscopusid7005485932
dc.contributor.authorSaygın, H.
dc.contributor.authorAy, A.Y.
dc.contributor.authorGüven, K.
dc.contributor.authorŞahi̇n, N.
dc.date.accessioned2020-06-21T12:18:51Z
dc.date.available2020-06-21T12:18:51Z
dc.date.issued2020
dc.departmentOndokuz Mayıs Üniversitesien_US
dc.department-temp[Saygın] Hayrettin, Department of Biology, Ondokuz Mayis Üniversitesi, Samsun, Turkey; [Ay] Hilal, Department of Molecular Biology and Genetics, Ondokuz Mayis Üniversitesi, Samsun, Turkey; [Güven] Kiymet, Department of Biology, Eskisehir Technical University, Eskisehir, Eskisehir, Turkey; [Şahi̇n] Nevzat, Department of Molecular Biology and Genetics, Ondokuz Mayis Üniversitesi, Samsun, Turkeyen_US
dc.description.abstractThree isolates, 5K138T, 8K307T and KC603T, with typical morphological characteristics of members of the genus Jiangella were obtained during a study searching for novel actinobacteria with biosynthetic potential from the Karakum Desert. A polyphasic approach was adopted to determine taxonomic affiliations of the strains. The strains showed chemotaxonomic properties consistent with their classification as representing members of the genus Jiangella such as ll-diaminopimelic acid in the cell wall peptidoglycan, diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol as major polar lipids as well as MK-9(H<inf>4</inf>) as a major menaquinone. Pairwise sequence comparisons of the 16S rRNA genes showed that the strains were closely related to Jiangella alba DSM 45237T, Jiangella rhizosphaerae NEAU-YY265T and Jiangella mangrovi 3SM4-07T with higher than 99% sequence identities. However, a combination of phenotypic and phylogenetic approaches as well as genome-based comparative analyses confirmed the taxonomic positions of these strains as representing distinct species within the genus Jiangella. Therefore, strains 5K138T, 8K307T and KC603T should each be classified as representing a novel species within the genus Jiangella, for which the names Jiangella asiatica sp. nov., Jiangella aurantiaca sp. nov. and Jiangella ureilytica sp. nov. are proposed, respectively. The type strains of the proposed novel species are as follows: Jiangella asiatica 5K138T (=JCM 33518T=CGMCC 4.7672T), Jiangella aurantiaca 8K307T (=JCM 33519T=CGMCC 4.7621T) and Jiangella ureilytica KC603T (=JCM 33520T=CGMCC 4.7618T). © 2020 The Authors.en_US
dc.identifier.doi10.1099/ijsem.0.004011
dc.identifier.endpage2002en_US
dc.identifier.issn1466-5026
dc.identifier.issn1466-5034
dc.identifier.issue3en_US
dc.identifier.pmid32228773
dc.identifier.scopus2-s2.0-85082731210
dc.identifier.scopusqualityQ3
dc.identifier.startpage1993en_US
dc.identifier.urihttps://doi.org/10.1099/ijsem.0.004011
dc.identifier.volume70en_US
dc.identifier.wosWOS:000529153300001
dc.identifier.wosqualityQ3
dc.language.isoenen_US
dc.publisherMicrobiology Society journals@microbiologysociety.org Charles Darwin House12 Roger Street London WC1N 2JUen_US
dc.relation.ispartofInternational Journal of Systematic and Evolutionary Microbiologyen_US
dc.relation.journalInternational Journal of Systematic and Evolutionary Microbiologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectActinobacteriaen_US
dc.subjectGenomeen_US
dc.subjectJiangellaen_US
dc.subjectKarakum Deserten_US
dc.titleGenome-Based Classification of Three Novel Actinobacteria From the Karakum Desert: Jiangella asiatica sp. nov., Jiangella aurantiaca sp. nov. and Jiangella ureilytica sp. noven_US
dc.typeArticleen_US
dspace.entity.typePublication

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