Publication:
Polyhydroxyalkanoate Accumulation in Streptomyces Coelicolor Affected by Sco7613 Gene Region

dc.authorscopusid57225964374
dc.authorscopusid45860943900
dc.authorscopusid6602432338
dc.authorscopusid16029900000
dc.authorwosidYagci, Nevin/L-9294-2015
dc.authorwosidYagci, Nevin/L-9294-2015
dc.authorwosidDemir Öksüz, Zeynep/Lmn-9623-2024
dc.authorwosidDoruk, Tugrul/A-5699-2015
dc.contributor.authorDemir Oksuz, Zeynep
dc.contributor.authorDoruk, Tugrul
dc.contributor.authorYagci, Nevin
dc.contributor.authorTunca Gedik, Sedef
dc.contributor.authorIDYagci, Nevin/0000-0003-4286-6542
dc.contributor.authorIDYagci, Nevin/0000-0003-4286-6542
dc.contributor.authorIDDemir, Zeynep/0000-0002-9799-6224
dc.contributor.authorIDDoruk, Tugrul/0000-0002-0057-320X
dc.contributor.authorIDTunca Gedik, Sedef/0000-0001-6896-4904
dc.date.accessioned2025-12-11T01:36:51Z
dc.date.issued2021
dc.departmentOndokuz Mayıs Üniversitesien_US
dc.department-temp[Demir Oksuz, Zeynep; Doruk, Tugrul; Tunca Gedik, Sedef] Gebze Tech Univ, Fac Sci, Mol Biol & Genet Dept, Kocaeli, Turkey; [Yagci, Nevin] Istanbul Tech Univ, Fac Civil Engn, Dept Environm Engn, Istanbul, Turkey; [Doruk, Tugrul] Ondokuz Mayis Univ, Fac Arts & Sci, Mol Biol & Genet Dept, Samsun, Turkeyen_US
dc.descriptionYagci, Nevin/0000-0003-4286-6542; Yagci, Nevin/0000-0003-4286-6542; Demir, Zeynep/0000-0002-9799-6224; Doruk, Tugrul/0000-0002-0057-320X; Tunca Gedik, Sedef/0000-0001-6896-4904en_US
dc.description.abstractPolyhydroxyalkanoate (PHA) is stored as an important carbon and energy source in bacterial cells. For biomedical applications, gram-positive bacteria can be better sources of PHAs, since they lack outer membrane lipopolysaccharide. Although gram-positive Streptomyces coelicolor A3(2) has been indicated as a high potential PHA producer, phaC gene that encodes the key enzyme PHA synthase in the metabolic pathway is not determined in its genome. BLAST search results of the GenBank database argued that SCO7613 could specify a putative polyhydroxyalkanoate synthase (PhaC) responsible for PHA biosynthesis. Deduced amino acid sequence of SC07613 showed the presence of conserved lipase box like sequence, (55)(5)GASAG(555), in which serine residue was present as the active nucleophile. Present study describes deletion of putative S. coelicolor phaC gene via PCR dependent method. We showed that SCO7613 is not an essential gene in S. coelicolor and its deletion affected PHA accumulation negatively although it is not ceased. Transcomplementation abolished the mutant phenotype, demonstrating that the decrease in PHA resulted from the deletion of SCO7613.en_US
dc.description.sponsorshipGebze Technical University [BAP-2012-A-01]en_US
dc.description.sponsorshipThis work was supported by a research grant (BAP-2012-A-01) from Gebze Technical University.en_US
dc.description.woscitationindexScience Citation Index Expanded
dc.identifier.doi10.3906/biy-2011-16
dc.identifier.endpage286en_US
dc.identifier.issn1300-0152
dc.identifier.issn1303-6092
dc.identifier.issue3en_US
dc.identifier.pmid34377052
dc.identifier.scopus2-s2.0-85109843531
dc.identifier.scopusqualityQ3
dc.identifier.startpage275en_US
dc.identifier.urihttps://doi.org/10.3906/biy-2011-16
dc.identifier.urihttps://hdl.handle.net/20.500.12712/44879
dc.identifier.volume45en_US
dc.identifier.wosWOS:000667755700004
dc.identifier.wosqualityQ3
dc.language.isoenen_US
dc.publisherTÜBİTAK Scientific & Technological Research Council Turkeyen_US
dc.relation.ispartofTurkish Journal of Biologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectStreptomyces Coelicoloren_US
dc.subjectSco7613en_US
dc.subjectPolyhydroxyalkanoate Synthaseen_US
dc.subjectPHACen_US
dc.subjectGlycerolen_US
dc.titlePolyhydroxyalkanoate Accumulation in Streptomyces Coelicolor Affected by Sco7613 Gene Regionen_US
dc.typeArticleen_US
dspace.entity.typePublication

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