Publication:
A Comparison of Automated Segmentation and Manual Tracing of Magnetic Resonance Imaging to Quantify Lateral Ventricle Volumes

dc.authorwosidKamaşak Arpaçay, Burcu/Hjg-5781-2022
dc.authorwosidDeğirmencioğlu, Levent/Aan-7055-2021
dc.authorwosidAcer, Niyazi/Gqp-0769-2022
dc.authorwosidAkkuş Yetkin, Esra/Kyr-4042-2024
dc.authorwosidKarapinar, Burak Oğuzhan/Gqp-2707-2022
dc.authorwosidİpekten, Funda/Aad-3676-2022
dc.contributor.authorAcer, Niyazi
dc.contributor.authorKamasak, Burcu
dc.contributor.authorKarapinar, Burak Oguzhan
dc.contributor.authorYetkin, Esra Akkus
dc.contributor.authorIpekten, Funda
dc.contributor.authorGray, Serap Bastepe
dc.contributor.authorIlica, Ahmet Turan
dc.contributor.authorIDKarapınar, Burak Oğuzhan/0000-0001-9005-5504
dc.contributor.authorIDAkkus Yetkin, Esra/0000-0002-5069-4026
dc.date.accessioned2025-12-11T01:13:26Z
dc.date.issued2022
dc.departmentOndokuz Mayıs Üniversitesien_US
dc.department-temp[Acer, Niyazi] Istanbul Arel Univ, Dept Anat, Fac Med, Istanbul, Turkey; [Kamasak, Burcu] Kirsehir Ahi Evran Univ, Dept Anat, Fac Med, Kirsehir, Turkey; [Karapinar, Burak Oguzhan] Ondokuz Mayis Univ, Dept Med Serv & Tech, Hlth Serv Vocat Sch, Samsun, Turkey; [Yetkin, Esra Akkus] Adiyaman Univ, Dept Anat, Fac Med, Adiyaman, Turkey; [Ipekten, Funda] Erciyes Univ, Dept Biostat, Fac Med, Kayseri, Turkey; [Gray, Serap Bastepe] Johns Hopkins Univ, Dept Neurol, Peabody Conservatory, Baltimore, MD USA; [Degirmencioglu, Levent] Erciyes Univ, Dept Mus, Fac Fine Arts, Kayseri, Turkey; [Ilica, Ahmet Turan] Mem Sloan Kettering Canc Ctr, Dept Radiol, 1275 York Ave, New York, NY 10021 USAen_US
dc.descriptionKarapınar, Burak Oğuzhan/0000-0001-9005-5504; Akkus Yetkin, Esra/0000-0002-5069-4026;en_US
dc.description.abstractObjective: Ventricular volume measurements have been proposed as a useful biomarker for several neurological diseases. The goal of this study was to compare the performance of 3 fully-automated tools, volBrain (http://volbrain.upv.es ), ALVIN (Automatic Lateral Ventricle Delineation) (https://sites.google.com/site/mrilateralventricle/), and MRICIoud (http://mricloud.org ), with expert hand tracing to quantify lateral ventricle (LV) volume using magnetic resonance images. Materials and Methods: The sample comprised 24 healthy subjects (age: 25.1 +/- 5.7 years, all male). Volumes derived from each automated measurement were compared to hand tracing results performed by 2 specialists to assess the percent volume difference using the intraclass correlation coefficient (ICC), concordance correlation coefficient (CCC), Dice index value, and Bland-Altman analysis. Results: The ICC agreement of the Manual_1 and Manual_2 was very good (0.979), and there was no statistically significant difference (p>0.001). The volume difference of all methods was similar. The CCC with MRICloud and ALVIN was higher than that of volBrain. Bland-Altman plots indicated that the 3 automated methods demonstrated acceptable agreement. Conclusion: Compared with hand tracing, the LV volumes generated by MRICloud were more accurate than those of volBrain and ALVIN. LV volume values can provide valuable data related to the volumetric dependencies of the anatomical structures in various clinical conditions that can now be easily obtained using automated tools.en_US
dc.description.sponsorshipErciyes University Scientific Research Projects Coordination Unit [TIR-2017-5045]en_US
dc.description.sponsorshipThis study has been supported by Erciyes University Scientific Research Projects Coordination Unit under grant number TIR-2017-5045.en_US
dc.description.woscitationindexEmerging Sources Citation Index
dc.identifier.doi10.14744/etd.2021.73920
dc.identifier.endpage155en_US
dc.identifier.issn2149-2247
dc.identifier.issn2149-2549
dc.identifier.issue2en_US
dc.identifier.startpage148en_US
dc.identifier.trdizinid530625
dc.identifier.urihttps://doi.org/10.14744/etd.2021.73920
dc.identifier.urihttps://search.trdizin.gov.tr/en/yayin/detay/530625/a-comparison-of-automated-segmentation-and-manual-tracing-of-magnetic-resonance-imaging-to-quantify-lateral-ventricle-volumes
dc.identifier.urihttps://hdl.handle.net/20.500.12712/42116
dc.identifier.volume44en_US
dc.identifier.wosWOS:000774517900006
dc.language.isoenen_US
dc.publisherErciyes University School Medicineen_US
dc.relation.ispartofErciyes Medical Journalen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectAlvinen_US
dc.subjectLateral Ventricleen_US
dc.subjectManual Tracingen_US
dc.subjectMRIClouden_US
dc.subjectVolBrainen_US
dc.titleA Comparison of Automated Segmentation and Manual Tracing of Magnetic Resonance Imaging to Quantify Lateral Ventricle Volumesen_US
dc.typeArticleen_US
dspace.entity.typePublication

Files